Regulated Operon: yobW

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yobW csk22 + 2083425..2083970

 

Operon evidence: upstream and downstream genes are in the opposite direction
Reference: Henriques AO, et al. (1997)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigK Promoter -43:+9 2083364..2083415 ATTTCAGCTACTATTTCCGACCGGATAAGCATACACTTCTCAACGGAGGGGA Henriques AO, et al. (1997): PE HM DB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
CTAAAACATGTTCATCCTCCGGAGAGTAATAAATCGATGTTCCTTCTCTGCGCGATTTGACAAGCCGGAGATTTTTTAAAAATCTA
                >>>>>>>>>>>>>>>>>>>>>>>>         <<<<<<<<<<<<<<<<<<<<<
2084054..2084107
84..137
-21.0
 yobW

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai