 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yraGF-adhB-yraED |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yraG | + | 2752027..2752272 | ||||
| yraF | + | 2752290..2752658 | ||||
| adhB | + | 2752677..2753813 | alcohol dehydrogenase | COG1063 | adhB-BAC-1 adhB-BAC-2 | |
| yraE | + | 2753832..2754029 | ||||
| yraD | + | 2754045..2754344 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Wang S, et al. (2006) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+25 | 2751966..2752029 | TTCTGTATGCTTCAACTTCATTTCGGGAAATGTAACGTTGATAAAAGGAGGTTACATCAATATG |
Wang S, et al. (2006): AR, Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAGCCGCTGTCGTTCGTCAGCCAGGATATTTTTTCGAGCTTCT >>>>>> <<<<<<<< |
yraD |
|