Regulated Operon: yrhIJ

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yrhI fatR - 2776297..2776881
COG1309  
yrhJ
- 2773117..2776281
COG0369  

Operon evidence: Genome analysis
Reference: Palmer CN, et al. (1999), Genbank U93874
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AbrB Negative ND ND ND Gustafsson MC, et al. (2001): RG
YrhI Negative ND ND ND Gustafsson MC, et al. (2001): RG
SigM Promoter ND ND ND Thackray PD, et al. (2003): RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TAAAATCCCGCCAATCTGATTGGCGGGATTGCTTTGCATATGA
     >>>>>>>>>>   <<<<<<<<<<
2773085..2773107
10..32
-19.3
yrhJ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai