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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yrhIJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yrhI | fatR | - | 2776297..2776881 | COG1309 | ||
| yrhJ | - | 2773117..2776281 | COG0369 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Palmer CN, et al. (1999), Genbank U93874 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AbrB | Negative | ND | ND | ND |
Gustafsson MC, et al. (2001): RG |
| YrhI | Negative | ND | ND | ND |
Gustafsson MC, et al. (2001): RG |
| SigM | Promoter | ND | ND | ND |
Thackray PD, et al. (2003): RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAAAATCCCGCCAATCTGATTGGCGGGATTGCTTTGCATATGA >>>>>>>>>> <<<<<<<<<< |
yrhJ |
|