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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yrrRS |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yrrR | pbpI | - | 2788913..2790667 | COG0768 | ||
| yrrS | - | 2788147..2788848 |
| Operon evidence: | Genome analysis; SigE drives transcription of both yrrR and yrrS. |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | ND | ND | ND |
Wei Y, et al. (2004): RG DB |
| SigF | Promoter | -39:+16 | 2790665..2790719 | ATCTGTTTAGCAGCGAAACACCTCGTCCACAATGTGGGTGAGGTGTTTTTTTATG |
Wang S, et al. (2006): AR, Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ATAAACAAAAGCAGCCGGGTTAAAACCGGCTGCTTTTGTTTTAGGCTT >>>>>>>> <<<<<<<< |
yrrS |
|