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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yvgRQ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yvgR | cysJ | - | 3431369..3433186 | COG0369 | ||
| yvgQ | cysI | - | 3429628..3431343 | COG0155 | x0164-BAC x0164-STA |
| Operon evidence: | reverse transcription PCR |
|---|---|
| Reference: | Guillouard I, et al. (2002) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YwfK | Positive | -75:-50 | 3433280..3433305 | ATCATTAGGATTCTTAATAGTTATCA |
Guillouard I, et al. (2002): PE FT |
| SigA | Promoter | -40:+5 | 3433226..3433270 | TATATTTTACTTAAGCCTAGTATTCCGGTAAAGTTCAATTAGATG |
Guillouard I, et al. (2002): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GACGAGAGACAGGGAGTAGCTTCCTGTCTCTTTTTTCTATAATTT >>>>>>>>>>> <<<<<<<<<<< |
yvgQ |
|