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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yvrE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yvrE | - | 3404690..3405568 | COG3386 |
| Operon evidence: | Northern blotting (0.9 kb transcript) |
|---|---|
| Reference: | Serizawa M, et al. (2005) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | ND | 3405593..3405633 | AGTGGTTTGGACACCTCTTTGCCGGGAATAACAATATATAG |
Petersohn A, et al. (1999): HB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACGCATCCGAAACACGGATGCGTTTTTTTATACTACA >>>>>>>> <<<<<<<< |
yvrE |
|