Regulated Operon: yvrPON

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yvrP
- 3413053..3414246
COG0845  
yvrO
- 3412380..3413069

 
yvrN yziB, yvrM - 3411158..3412408

 

Operon evidence: Genome analysis
Reference:
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
ComK Positive ND 3414440..3414459 ATATGACTTGATTAAAAATG Ogura M, et al. (2002): AR RG HM DB
ComK Positive ND 3414403..3414423 TGTATGAAAAAATCCCGGTTT Ogura M, et al. (2002): AR RG HM DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGCTATGAATAAAAAGAACGCATCCAATTGGAATGCGTTCTTTTTTTAGCTGGGA
               >>>>>>>>>>    <<<<<<<<<<<
3411130..3411154
4..28
-15.6
yvrN

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai