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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ywbI-thiME |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ywbI | ipa-24d | - | 3931221..3932126 | COG0583 | ||
| thiM | thiK, ipa-25d, ywbJ | - | 3930395..3931213 | hydroxyethylthiazole kinase | COG2145 | |
| thiE | thiC, ipa-26d, ywbK | - | 3929730..3930398 | thiamine-phosphate pyrophosphorylase | COG0352 | thiC-BAC |
| Operon evidence: | Northern blotting (2.4 kb transcript) |
|---|---|
| Reference: | Zhang Y, et al. (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -40:+9 | 3932165..3932213 | TACTTATTGTACATAAGGTCTCTCTATAGGTAAAATATATATTAAGAAT |
Zhang Y, et al. (1997): PE NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAGGGCTGTTCTGTAAAAGGACAGCTTTTTTGCTGTCCAT >>>>>>>> <<<<<<<< |
thiE |
|