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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ywdL |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ywdL | ipa-62r, gerQ | + | 3892458..3893003 |
| Operon evidence: | Genome analysis; upstream and downstream genes are on the opposite strand |
|---|---|
| Reference: | Presecan E, et al. (1997) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -46:+7 | 3892296..3892348 | GTTCTTTTTCAGCATAATCCAAGCATCAGCCTCATAAGGTGAAAGAGATAAAA |
Ragkousi K, et al. (2003): PE RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCCAATCACTCATATGATGAGGATTGGCTTTTTTGTTTATAGA >>>>>>>>>>>>> <<<<<<<<<<<< |
ywdL |
|