Regulated Operon: ywlFG

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ywlF ipc-32d - 3790222..3790671
COG0698 lmo2662-BAC  
ywlG ipc-33d - 3789667..3790209
COG4475  

Operon evidence: Northern blotting (1.1 kb transcript)
Reference: Yoshida K, et al. (2003), Presecan E, et al. (1997), Genbank Z38002
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
TnrA Negative ND 3790809..3790825 TGTCAGAAAATCTGCAA Yoshida K, et al. (2003): AR HM GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GAAAGGACTGCATAGCCAGTCTTTTCTTTTATTTTA
     >>>>>      <<<<<
3789648..3789663
4..19
-5.6
ywlG

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai