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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ywlFG |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| ywlF | ipc-32d | - | 3790222..3790671 | COG0698 | lmo2662-BAC | |
| ywlG | ipc-33d | - | 3789667..3790209 | COG4475 |
| Operon evidence: | Northern blotting (1.1 kb transcript) |
|---|---|
| Reference: | Yoshida K, et al. (2003), Presecan E, et al. (1997), Genbank Z38002 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| TnrA | Negative | ND | 3790809..3790825 | TGTCAGAAAATCTGCAA |
Yoshida K, et al. (2003): AR HM GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GAAAGGACTGCATAGCCAGTCTTTTCTTTTATTTTA >>>>> <<<<< |
ywlG |
|