Regulated Operon: yxeD

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yxeD
+ 4065225..4065578

 

Operon evidence: Northern blotting (0.4 kb transcript); downstream gene is on the opposite strand
Reference: Yoshida K, et al. (2000)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -39:+36 4065153..4065227 GACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATG Wang S, et al. (2006): AR, Race-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TAAAAGGCTCAACACAATGCGAGTGTTGAGCCTTTTTCCTTACTGTT
     >>>>>>>>>>       <<<<<<<<<<
4065588..4065614
10..36
-19.1
yxeD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai