Regulated Operon: yxeKLMNOPQ

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yxeK
- 4059834..4061159
COG2141  
yxeL
- 4059323..4059820
COG0454  
yxeM
- 4058504..4059298
COG0834  
yxeN
- 4057807..4058481
COG0765  
yxeO
- 4057045..4057794
COG1126 glnQ-BAC-3  
yxeP
- 4055886..4057028
COG1473  
yxeQ
- 4054552..4055889
COG2079  

Operon evidence: lacZ assay
Reference: Burguiere P, et al. (2004), Yoshida K, et al. (2000), BSORF
Comments: Yoshida found a yxeKLMNOPQ (7.0 kb) mRNA transcript, and a yxeR-yxxB (2.4 kb) transcript by Northern blotting analysis. yxeR and yxxB monocistronic transcripts (1.4 kb and 1.0 kb, respectively) were also detected. Burguiere et al., on the other hand, show a yxeKLMNOPQR operon.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -58:+10 4061231..4061297 AGAAAAAATTAATCTTAACTCATTGACAAACGTCCAAGACAAAGGTACATTTTGATTTATTCATATT Auger S (2003): Thesis: PE
Even S, et al. (2006): PE
YrzC Negative +1:+45 4061195..4061239 ATTCATATTAAACGACTAGGAATATAGGAGTTTATTTTTCGCATT Even S, et al. (2006): GS AR DP
YjbD Negative ND ND ND Erwin KN, et al. (2005): RG DB

Terminator

No Data

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai