Transcription factor: BkdR

Factor type ND
SWISS-PROT P54529
SubtiList BG11721
Consensus seq. TGCAAATGAAGGCA(forward), TGCAATAATTTGCA(forward), TGCAGATGTTTGCG(reverse)(plausible)
Comment None
Link to Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
ptb-bcd-buk-lpdV-bkdAABB ptb SigL Positive 2503979..2504012 -128:-95 AATATGGCCTTGCAAATGAAGGCATGCAATAATT Debarbouille M, et al. (1999): DB
ptb-bcd-buk-lpdV-bkdAABB ptb SigL Positive 2503965..2503998 -114:-81 AATGAAGGCATGCAATAATTTGCAGAATAAACGC Debarbouille M, et al. (1999): DB
ptb-bcd-buk-lpdV-bkdAABB ptb SigL Positive 2503944..2503977 -93:-60 GCAGAATAAACGCAAACATCTGCACGAATGTTTC Debarbouille M, et al. (1999): DB




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai