Transcription factor: YdiH

Factor type ND
SWISS-PROT O05521
SubtiList BG12205
Consensus seq. TTTGTGAADTABTGAKCAAWDT
Comment None
Link to Phylogenetic profile

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
alsSD alsS SigA Negative 3710407..3710442 -59:-24 AAAGAGTGTATAGTGAAACTTATCACAAGATATTTA Reents H, et al. (2006): RG
cydABCD cydA SigA Negative 3978305..3978346 +64:+105 TTTTGACACATTTGTGAAATATTGAGCAATATTTTTTTCGTC Schau M, et al. (2004): RG FT
Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG
cydABCD cydA SigA Negative 3978270..3978311 +99:+140 TTTCGTCTATTTTGTGAATTACTGATCAAAGTCTCGGTTCTA Schau M, et al. (2004): RG FT
Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG
cydABCD cydA SigA Negative 3978238..3978279 +131:+172 CTCGGTTCTATTTGTGAAGTAGTGAGCAAATTAACAGTTTTA Schau M, et al. (2004): RG FT
Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG
ldh-lctP ldh SigA Negative 329230..329277 -39:+9 TCTCTTGCAAAAGTTTGTGAAGTGTTGCACAATATAAATGTGAAATAC Larsson JT, et al. (2005): RG DB
ldh-lctP ldh SigA Negative 329261..329314 -8:+46 ATATAAATGTGAAATACTTCACAAACAAAAAGACATCAAAGAGAAACATACCCT Larsson JT, et al. (2005): RG DB
ywcJ ywcJ SigA Negative 3904282..3904317 -59:-24 AAAAATTAATTGTGAAATACTTCACAATATCGTGCC Larsson JT, et al. (2005): RG DB
Reents H, et al. (2006): RG DB SDM




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai