Regulated Operon: ackA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ackA
- 3015111..3016298
COG0282C ackA-BAC ackA-STA ackA-STR  

Operon evidence: Genome analysis
Reference: Grundy FJ, et al. (1993)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
CcpA Positive -124:-110 3016499..3016513 TGTAAGCGTTCATCA Grundy FJ, et al. (1993): DB DP
CcpA Positive -74:-41 3016430..3016463 GACTTCTTATTGTAAGCGTTATCAATACGCAAGT Grundy FJ, et al. (1993): DB DP
SigA Promoter -44:+6 3016385..3016434 CAAGTTGACTTGAAAAGCCGACATGACAATGTTTAAATGGAAAAGTCAGA Grundy FJ, et al. (1993): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TGAAAGCACATTCTCTTGAATGTGCTTTTTTGTTGATGCA
     >>>>>>>>    <<<<<<<<
3015080..3015099
12..31
-12.5
ackA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai