Regulated Operon: csbA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
csbA
- 3615116..3615346
COG4897S  

Operon evidence: terminator-probe plasmids
Reference: Boylan SA, et al. (1991)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -40:+4 3615371..3615414 ACGATTGTCCGATTCTTCATTTTTTACTATAATCAGATCAGATG Boylan SA, et al. (1991): PE DB RG
SigB Promoter -40:+3 3615427..3615469 ATGGTGATTGATTTTGGCTGAAAAGGGGTATGGTGTAAGTAGA Boylan SA, et al. (1991): PE DB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
GAATACCTGCTTTTACGTTTTAAAAGCAGGTTTTTTATACACAAA
     >>>>>>>>>>     <<<<<<<<<<
3615061..3615085
31..55
-14.9
 csbA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai