Regulated Operon: dhbACEBF

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
dhbA entA - 3291511..3292296
COG1028IQR  
dhbC
- 3290289..3291485
COG1169HQ dhbC-BAC  
dhbE entE - 3288641..3290260
COG1021Q dhbE-BAC dhbE-BAC  
dhbB
- 3287675..3288613
COG1535Q dhbB-BAC  
dhbF
- 3280519..3287655
COG1020Q  

Operon evidence: operon disruption
Reference: Rowland BM, et al. (1996)
Comments: operon disruption showed that at least the first four genes belong to the same operon


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
Fur Negative +7:+22 3292363..3292412 TTATTTTTATAATTGATAATGATAATCATTATCAATAGATTGCGTTTTTC Baichoo N, et al. (2002): FT
Ollinger J, et al. (2006): DB SDS-PAGE
SigA Promoter -39:+1 3292405..3292444 ATATTTGACTGTCACATGACATTTGGATATGATTATTTTT Rowland BM & Taber HW (1996): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGAGACTGCTTGCCGCAGTCTCTTTTTCTATCTTACG
     >>>>>>>>     <<<<<<<<
3280261..3280281
238..258
-15.4
dhbF

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai