Regulated Operon: gerM

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
gerM
- 2902002..2903102
COG5401R  

Operon evidence: Genome analysis
Reference: Wipat A, et al. (1996)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -39:+8 2903120..2903166 TTCGGTCTATTTCCTAAAGAGGCTCGTATACATAATAGTACAAACAT Eichenberger P, et al. (2003): AR, 5'-RACE-PCR
SpoIIID Negative ND ND ND Eichenberger P, et al. (2004): GS AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AGAAAGAGGTTAGCGTTCCGGCTGCCTCTTTCTTTATTCAATT
     >>>>>>>>>      <<<<<<<<
2901950..2901972
30..52
-10.7
gerM

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai