Regulated Operon: gtaB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
gtaB
+ 3665629..3666507
COG1210M galU-STA  

Operon evidence: Genome analysis
Reference: Varon D, et al. (1993)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -40:+7 3665509..3665555 AAAGCTTGTTTAAAAATGGTTTATCCGATATCATAAAAATGTGTAAA Varon D, et al. (1993): PE
SigB Promoter -40:+3 3665544..3665586 AAAATGTGTAAAAACATATTGAAAAGGGTAAATAGAGAATAGT Varon D, et al. (1993): PE DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AAATCTAAACAAAAAGGCTATTGGACATTCATCCAATAGCCTTTTTTTATTTCAACATCAAAGTCAA
               >>>>>>>>>>      <<<<<<<<<<
3666515..3666540
8..33
-17.2
 gtaB

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai