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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | guaD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| guaD | yknA | - | 1382677..1383147 | COG0590FJ | guaD-BAC |
| Operon evidence: | downstream gene is on the opposite strand |
|---|---|
| Reference: | Nygaard P, et al. (2000) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PucR | Positive | -72:-37 | 1383208..1383243 | CCCCCAAATACTTTGTTTATTTTGCACTTTTTTAAG |
Beier L, et al. (2002): DP |
| SigA | Promoter | -41:+8 | 1383164..1383212 | TTAAGAATGTTCTTTGCATTCTTTTCGGCTATACTAATAACACTCTATT |
Nygaaard P, et al. (2000): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAAAAGGATCAGGCATGCGCGGCCTGGTCCTTGTTATTTCTCCAA >>>>>>>>> <<<<<<<<< |
guaD |
|