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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | hemAXCDBL |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| hemA | - | 2877766..2879133 | COG0373H | hemA-BAC-1 hemA-BAC-2 hemA-STA | ||
| hemX | - | 2876928..2877758 | COG0755O | hemX-STA | ||
| hemC | - | 2875951..2876895 | COG0181H | hemC-BAC-1 hemC-BAC-2 hemC-STA | ||
| hemD | - | 2875173..2875961 | COG1587H | |||
| hemB | - | 2874202..2875176 | COG0113H | |||
| hemL | hemK | - | 2872880..2874172 | COG0001H | x0761-STA |
| Operon evidence: | genetic modification of hemL |
|---|---|
| Reference: | Hansson M, et al. (1991) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PerR | Negative | ND | 2879194..2879222 | AGAAACTATGTTATAATTATTATAAATAA |
Herbig AF, et al. (2001): FT |
| PerR | Negative | ND | 2879148..2879189 | TTCTATGTTAGAATGATTATAAATTAAGATTGGGTGTTGGGG |
Herbig AF, et al. (2001): FT |
| SigA | Promoter | ND | 2879182..2879249 | TTTTAAAATCTGTTCACATTTTGTGAAAGAAACTATGTTATAATTATTATAAATAATGAGTTCTATGT |
Hansson M, et al. (1991): S1 |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GAAAACCGGTATCAAGGACTCCTTGTGCCGGTTTTTTCGTGCTCTC >>>>>>>>>>>> <<<<<<<<<<< |
hemL |
|