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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | mhqA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| mhqA | + | 1353080..1354030 | COG2514R |
| Operon evidence: | Northern blotting (1.0 kb transcript) |
|---|---|
| Reference: | Towe E, et al. (2007), Nguyen VD, et al. (2007) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -50:+10 | 1352961..1353020 | GGTGAAGCTGATATGTTGACTTTCTCATGCGAATAAAATACTTTGTTATTAGAACAATAA |
Towe S, et al. (2007): PE |
| YkvE | Negative | +20:+60 | 1353030..1353070 | TATGATATGATATCTCGAAATCGAGATAAAATAACCTGGAG |
Towe S, et al. (2007): AR 2D-gel GS HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTTTTGCCTTCCGGCGCCGCCGGAGGGCTTTTTTTATTACCATA >>>>>>>>>> <<<<<<<<<< |
mhqA |
|