Regulated Operon: pbpX

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
pbpX
+ 1765859..1767034
COG1680V x1202-BAC  

Operon evidence: Genome analysis
Reference: Cao M & Helmann JD (2004)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigW Promoter ND 1765780..1765818 TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA Cao M & Helmann JD (2004): RG
SigX Promoter ND 1765780..1765818 TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA Cao M & Helmann JD (2004): ROMA RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CACATTTACAATGAAGTTGTAACATTTGTTTTTTTAACA
     >>>>>>>   <<<<<<<
1767133..1767149
99..115
-6.1
pbpX

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai