Regulated Operon: spoIVCA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
spoIVCA cisA - 2653371..2654873
COG1961L  

Operon evidence: Genome analysis
Reference: Sato T, et al. (1990)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -44:+6 2654979..2655028 AAAATCTCCTCATTTGGACAAACAGCTGTTACATAGCATTACCCAAGGGG Sato T, et al. (1994): PE S1
SpoIIID Positive -47:-12 2654997..2655030 TTAAAATCTCCTCATTTGGACAAACAGCTGTTAC Halberg R, et al. (1994): FT RO
Eichenberger P, et al. (2004): GS AR
SpoIIID Positive +137:+154 2654831..2654848 CGACCGAGGAACAAGCGA Halberg R, et al. (1994): FT RO
Eichenberger P, et al. (2004): GS AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAGAGGGGTGTATGCACCCCCCTTTTGTAATTACAAT
     >>>>>>    <<<<<<
2653352..2653367
4..19
-11.8
spoIVCA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai