Regulated Operon: xpt-pbuX

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
xpt
- 2319440..2320024
COG0503F xprT-STA xpt-BAC  
pbuX ypaQ - 2318127..2319443
COG2233F  

Operon evidence: Northern blotting (2.1 kb transcript)
Reference: Christiansen LC, et al. (1997)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PurR Negative -97:-45 2320255..2320307 CTTGAAATACGAATGATATCTAAAAAAACAAAATTAAAGTTCGGGAATTTTTA Saxild HH, et al. (2001): HM RG DB
SigA Promoter -40:+5 2320206..2320250 CAGCCTATGCAAGAGATTAGAATCTTGATATAATTTATTACAATA Christiansen LC, et al. (1997): PE HM

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TCTAACTCCGCCGCGGCGGAGTTTTTTTTGCATATA
     >>>>>>    <<<<<<
2318111..2318126
1..16
-11.0
 pbuX

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai