 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yfkJIH |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yfkJ | + | 862004..862474 | COG0394T | yfkJ-BAC | ||
| yfkI | + | 862492..862812 | ||||
| yfkH | + | 862836..863663 | COG1295S |
| Operon evidence: | Northern blotting |
|---|---|
| Reference: | BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -44:+8 | 861909..861960 | GACATCAGTTGAAAAGAAAATGAACATCCTACTAAGATATTCATGAAGGTTT |
Price CW, et al. (2001): RACE-PCR |
| SigB | Promoter | -44:+9 | 861948..862000 | TTCATGAAGGTTTCTTTTTAGAGAAATAGGGGCAAAGAATAGGGAGGTTGCAC |
Price CW, et al. (2001): RACE-PCR DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAAAAGCCTCCTGACATGATGTCGGGAGGCTTTTTGATTAAGAAG >>>>>>>>>>> <<<<<<<<<<< |
yfkH |
|