Regulated Operon: ylbJ

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ylbJ
- 1570574..1571800
COG3314S  

Operon evidence: upstream and downstream genes are in the opposite direction
Reference: Genbank Z98682
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -39:+9 1571893..1571940 TATGGTCTAAACTGAACCCCTATGCTCGTATATTAGTACAAAGAATCA Eichenberger P, et al. (2003): AR, 5'-RACE-PCR
SpoIIID Negative ND ND ND Eichenberger P, et al. (2004): GS AR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TGACAAACGGAACAAAAAAAGGATGAGTCAAAACCCTCATCCTTGTCTGAATTTTTG
                    >>>>>>>        <<<<<<<
1570558..1570579
-5..16
-10.2
ylbJ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai