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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yqhQP |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yqhQ | + | 2541051..2542007 | COG3872R | yqhQ-BAC | ||
| yqhP | + | 2542047..2542442 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Petersohn A, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | ND | 2540891..2540932 | CTGCGAGTAAAATTTGAAAATAACGGGTATAATGCATGTAGA |
Petersohn A, et al. (1999): HB |
| SigF | Promoter | -50:+10 | 2540883..2540942 | TTTGGCAGCTGCGAGTAAAATTTGAAAATAACGGGTATAATGCATGTAGAAAAAGCAAGG |
Wang S, et al. (2006): AR, Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TTTACCTAGCTCAATCAGGGCTAGTTTTTTTTGTTGTGTT >>>>>>> <<<<<<< |
yqhP |
|