Regulated Operon: ytlI

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ytlI
+ 3008938..3009864
COG0583K  

Operon evidence: Genome analysis; downstream gene is on the opposite strand
Reference: Lapidus A, et al. (1997), Genbank AF008220
Comments: The terminator listed in Genbank and SubtiList lacks a T-stretch


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
YjbD Negative ND ND ND Erwin KN, et al. (2005): PE RG DB
YrzC Negative -60:-10 3008800..3008850 TTCACAAAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATAC Burguiere P, et al. (2005): DP
Even S, et al. (2006): GS FT AR
SigA Negative -54:+20 3008806..3008879 AAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATACTATAAAGCATACTCTGATCTTTGACTAAT Burguiere P, et al. (2005): PE
SigA Promoter -51:+23 3008806..3008879 AAATATATAATTCCTATTTGTTTACTAAGCTTTTATTGTTTATACTATAAAGCATACTCTGATCTTTGACTAAT Erwin KN, et al. (2005): PE

Terminator

No Data

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai