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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yvlABCD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yvlA | - | 3608447..3608773 | ||||
| yvlB | - | 3607325..3608422 | COG3595S | |||
| yvlC | - | 3607123..3607320 | COG1983KT | |||
| yvlD | - | 3606762..3607121 | COG1950S |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Huang X, et al. (1999) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AbrB | Negative | -79:-55 | 3608884..3608908 | TTAAAATCCAATTTCCGTAAATCGG |
Qian Q, et al. (2002): RG FT |
| SigW | Promoter | -38:+5 | 3608825..3608867 | GAATTTGAAACCTGAAGAGATTTTAAACGTATAAATAAGTAAA |
Huang X, et al. (1999): S1 Cao M, et al. (2002): AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCTGCCCGCAAAGGCAGCTTTTTTACATGTGGT >>>>>> <<<<<< |
yvlD |
|