Regulated Operon: cwlH

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
cwlH yqeE - 2648903..2649655
COG5632M  

Operon evidence: Northern blotting (0.8 kb transcript)
Reference: Nugroho FA, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
GerE Positive -160:-140 2649808..2649828 CCCAACTTAGGTGATGTCAGG Nugroho FA, et al. (1999): RG PE HM
SigK Promoter -40:+14 2649656..2649709 AAAGGCTGTCCATCTCTCTGTTTTCTGCATTCTTATTAATAGGGAGGGATAGAA Nugroho FA, et al. (1999): RG PE HM

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ACGGATAACCTGTTTCCAGTGCGGATTCAGGTTATTTTCTTTTCTTTGG
     >>>>>>>>>>>>     <<<<<<<<<<<<
2648857..2648885
18..46
-16.5
cwlH

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai