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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | gerE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| gerE | - | 2904727..2904951 | COG2197TK | gerE-BAC |
| Operon evidence: | integrational plasmids; Northern blotting (0.3 kb transcript) |
|---|---|
| Reference: | Cutting S & Mandelstam J (1986) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigK | Promoter | -42:+6 | 2905008..2905055 | TGTAAACGTCACCTCCTGCGCCCTTCTTACATATGATATCTCGACTAT |
Cutting S, et al. (1989): PE RG |
| SpoIIID | Positive | ND | ND | ND |
Halberg R, et al. (1995): RO |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CCTTGCCGGTATTCCTTCTTTTGGAAGGAGCCGGTTATTGCTGTTTGTT >>>>>>>>>>>>>> <<<<<<<<<<<< |
gerE |
|