Regulated Operon: gerE

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
gerE
- 2904727..2904951
COG2197TK gerE-BAC  

Operon evidence: integrational plasmids; Northern blotting (0.3 kb transcript)
Reference: Cutting S & Mandelstam J (1986)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigK Promoter -42:+6 2905008..2905055 TGTAAACGTCACCTCCTGCGCCCTTCTTACATATGATATCTCGACTAT Cutting S, et al. (1989): PE RG
SpoIIID Positive ND ND ND Halberg R, et al. (1995): RO

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CCTTGCCGGTATTCCTTCTTTTGGAAGGAGCCGGTTATTGCTGTTTGTT
     >>>>>>>>>>>>>>   <<<<<<<<<<<<
2904692..2904720
7..35
-18.5
gerE

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai