Regulated Operon: | sspG-yurS |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
sspG | + | 3354066..3354212 | ||||
yurS | + | 3354212..3354487 |
Operon evidence: | primer extension analysis of the downstream yurS gene; genes further downstream are on the opposite strand |
---|---|
Reference: | Bagyan I, et al. (1998) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
GerE | Positive | -99:-68 | 3353944..3353975 | TTACCAAATCAAATGCTTTCCTTCGACCTTTT |
Bagyan I, et al. (1998): DB RG |
GerE | Positive | -63:-31 | 3353980..3354012 | TAATGTGGAAAAACCGCGAAGTTCGTCCAATCT |
Bagyan I, et al. (1998): DB RG |
SigK | Promoter | -40:+3 | 3354003..3354045 | CGTCCAATCTCTTTACTCTCCTATCGAATATCCTGTCACTATC |
Bagyan I, et al. (1998): PE RG DB |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
AAAAACCGCGGCCCCTCGGCCAGCGGTTTTTCTTCTGCATA >>>>>>>> <<<<<<<<< |
yurS |
|