Regulated Operon: yxeE

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yxeE
+ 4065597..4065962

 

Operon evidence: Northern blotting (0.3 kb transcript)
Reference: Yoshida K, et al. (2000), Kuwana R, et al. (2008)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
GerE Positive -53:+21 4065516..4065589 TCCTTTTTTGGGCGAATGCCGTGCCACTGTGCCAATGACTACATAAGTTATAAGGAATTCACCCACAAGGAGAC Kuwana R, et al. (2008): DB NB
SigK Promoter -37:+11 4065531..4065579 ATGCCGTGCCACTGTGCCAATGACTACATAAGTTATAAGGAATTCACCC Eichenberger P, et al. (2004): Race-PCR
Takamatsu H, et al. (2000): SDS-PAGE
Kuwana R, et al. (2008): DB NB PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAA
     >>>>>>   <<<<<<<
4066129..4066144
167..182
-4.3
yxeE

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai