 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Factor type | ND |
|---|---|
| SWISS-PROT | ND |
| SubtiList | ND |
| Consensus seq. | AAATCGTAATNATTACGATTT |
| Comment | zinc-specific repression of operons implicated in zinc uptake (yciC, ycdHI-yceA) |
| Link to | Phylogenetic profile, Weight matrix & Motif alignment |
| Operon | Regulated Gene | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|---|---|
| ycdHI-yceA | ycdH | SigA | Negative | 308272..308306 | +1:+35 | AGGATTACAAAATCGTTATCATTTTGATTTAAAGT |
Gaballa A & Helmann JD (1998): DB GS HM RG Gaballa A, et al. (2002): PE |
| yciABC | yciA | SigA | Negative | 364211..364238 | -10:+18 | AAAATAAATAGTAATTATTACGATTTGT |
Gaballa A, et al. (2002): GS FT |
| yciABC | yciC | SigA | Negative | 365792..365819 | -10:+18 | AATTTAAATCGTAACAATTACGTTTTAT |
Gaballa A, et al. (2002): GS Gabriel, S.E., et al. (2008): SDM |
| yciABC | yciC | SigA | Negative | 366022..366049 | +221:+248 | AATTTAAATCGTAATCATTCTATTTTAA |
Gaballa A & Helmann JD (1998): DB RG GS HM FT Gaballa A, et al. (2002): GS Gabriel, S.E., et al. (2008): SDM |
|