HrcA

We scaned HrcA binding sites at upstream reagion of the ortholog genes by PSSM.

Transcription FactorRegulatec geneorganismpositioncis-elementsocre
HrcAdnaKSpy-57..-83TAAGCACTCGAATTATTTTACTTCCAA7
HrcAdnaKMpu-140..-166TTAGCACTTTATTCATTTGAGTGCTAA22.3
HrcAdnaKMge-50..-76TTAGCACTTTTAGTGTTTGAGTGCTAA19.4
HrcAdnaKUur-67..-93TTGGCACTTGTCAATATTGAGTGCTAA22.1
HrcAdnaKEco-39..-65TCACCACGCGTTACCTGGGTGGTCTTA7.5
HrcAdnaKEcZ-39..-65TCACCACGCGTTACCTGGGTGGTCTTA7.5
HrcAdnaKEcs-39..-65TCACCACGCGTTACCTGGGTGGTCTTA7.5
HrcAdnaKYpe-65..-91GGATCACTCTCCAAATCAGGGCGCGAC9.5
HrcAdnaKMlo-35..-61TCGGCGCTCGCGGGAGAAGCGTGCGCT7.2
HrcAdnaKSyn-123..-149TTAGTTCTCGGAAGTGCAGGTTTCCGT7.2
HrcAdnaKNos-244..-270TTAGCAAAAGTTTATAAGCAGTGATAA12.1
HrcAdnaKTma-181..-207ATAGCTCACTTTTGATCTGAATTGTTA11
HrcAgroESBsu-167..-193TATGTACTCCTTTGTTAAGTGGGTTTC6.9
HrcAgroESBha-41..-67TTAGCACTCGTTTGAAGAGAGTGCTAA31.9
HrcAgroESCac-81..-107TTAGCACTCGTTAATCTTGAGTGCTAA31.5
HrcAgroESLla-27..-53TTAGCACTCGTTTAATAAGAGTGCTAA30.7
HrcAgroESSpy-37..-63TTAGCCCTCGATGAACATGAGTGCTAA21.5
HrcAgroESSpn-32..-58TTAGCACTCTTTGAACTTGAGTGCTAA25.9
HrcAgroESMge-71..-97TAAATATTAATTAATGTTTAGCGCTAA7.7
HrcAgroESMtu-174..-200CTAGCACTCTCATGTATAGAGTGCTAG23.4
HrcAgroESMtC-174..-200CTAGCACTCTCATGTATAGAGTGCTAG23.4
HrcAgroESMle-211..-237CTAGCACTCGCGTGTATAGAGTGCTAG24
HrcAgroESXfa-50..-76TTAGCACTCTTATGTAATGAGTGCTAA28.6
HrcAgroESRso-92..-118TTGGCACTCGCCTGGAGGGAGTGCTAA24.6
HrcAgroESHpy-3..-29TTAGTTCTCCTAAGTTTTGATAAATAA8.4
HrcAgroESBme-62..-88TTAGCACTCTATTCGTCCGAGTGCTAA26.5
HrcAgroESMlo-54..-80TTAGCACTCGCTATTGGGGAGTGCTAA33.3
HrcAgroESCcr-61..-87TTAGCAGTCGCTCCATTCGAGTGCCAA18.5
HrcAgroESCtr-136..-162ATAGCAGTTGATCATGCCAACTGCTAA13.3
HrcAgroESCpn-88..-114TTAGCACTCAATAATTTTAAGTGCTAA25.2
HrcAgroESSyn-49..-75TTAGCACTCGTGAGGTGGGAGTGCTAA29
HrcAgroESNos-20..-46TTAGCACTCAGGAGTTGAGAGTGCTAA29.2
HrcAgroESTma-23..-49TTAGCAGTCGAATGATGAGAGTGCTAA25.4
HrcAgroESFnu-26..-52TTAGCACTTAATTAAGTAGAGTGCTAA22.9

position : counted from translation start site.