Regulated gene:nasD

Direction -
Start position 355336..357753
Operon nasDEF
Transcription start site 4144906
COG ID COG1251
Profile assimilatory nitrite reductase (subunit)


Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Exp. Reference Year
ResD Positive ND ND ND
resD-resE mutation Nakano MM et al. 1998
ResD Positive -83:-39 357811..357854 TAAAATTTTTAGAACTTTTCGTATATTTTGTTACATTTTATAAC
ND Nakano, M. M., et al. 2001
sigma_unknown ND -50:+6 357766..357821 CATTTTATAACATGTATCTTAAATATTCCTTTTTGCTGTGCTACGCTG
GAAAAAAC
ND Nakano MM, et al. 2000
TnrA Positive ND ND ND
Consensus Nakano MM et al. 1998
TnrA Positive ND 357810..357826 TGTTACATTTTATAACA
AR HM gel-retardation Yoshida K, et al. 2003
YwiD Positive ND ND ND
ND Marino M, et al. 2001

Alignment Result: Bacillus genera








Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2003
Contact: knakai@ims.u-tokyo.ac.jp