Regulated Operon: ackA

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
ackA
- 3014150..3015337 acetate kinase COG0282 ackA-BAC ackA-STA ackA-STR  

Operon evidence: Genome analysis
Reference: Grundy FJ, et al. (1993)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
CcpA Positive -124:-110 3015538..3015552 TGTAAGCGTTCATCA Grundy FJ, et al. (1993): DB DP
CcpA Positive -74:-41 3015469..3015502 GACTTCTTATTGTAAGCGTTATCAATACGCAAGT Grundy FJ, et al. (1993): DB DP
SigA Promoter -44:+6 3015424..3015473 CAAGTTGACTTGAAAAGCCGACATGACAATGTTTAAATGGAAAAGTCAGA Grundy FJ, et al. (1993): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TGAAAGCACATTCTCTTGAATGTGCTTTTTTGTTGATGCA
     >>>>>>>>    <<<<<<<<
3014119..3014138
12..31
-12.5
ackA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai