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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | adaAB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| adaA | + | 203715..204350 | methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC/XylS family) | COG2169 | ||
| adaB | + | 204337..204876 | O6-methylguanine-DNA methyltransferase | COG0350 |
| Operon evidence: | Northern blotting (1.6 kb transcript) |
|---|---|
| Reference: | Morohoshi F, et al. (1990), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AdaA | Positive | ND | ND | ND |
Morohoshi F, et al. (1993): FT |
| SigA | Promoter | -49:+18 | 203545..203611 | ACATTCTAACCACCTTATTTTTTTCTATTTATGAGGTTATAGTGTAGTTATCAAGAATGCTAAACGG |
Morohoshi F, et al. (1993): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GTGAAGCCGACAATTTTCAGGATTCAATGATCTAACATAATCATTGAAATTTTGAAGTTGTCGGCTTTTTTGTTGGAAAA >>>>>>>>>>>>>>>>>>>>>>>>>> <<<<<<<<<<<<<<<<<<<<<<<<<< |
adaB |
|