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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | asnO |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| asnO | yisO, yucB | + | 1156542..1158386 | asparagine synthetase | asnO-BAC x0747-BAC |
| Operon evidence: | Northern blotting (2.0 kb transcript) |
|---|---|
| Reference: | Yoshida K, et al. (1999), Genbank Z93940 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -40:+5 | 1156447..1156491 | ACAAATCAACTATCTGCCTATAGATGCATAAACTTACTAAGGTGC |
Yoshida K, et al. (1999): NB PE |
| SpoIIID | Positive | ND | ND | ND |
Eichenberger P, et al. (2004): GS AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAGAAGGATAGATGAGCAGGGAAATATATGCTCTATCTATCCTTTTTTGTACAACAG >>>>>>>>>>>>> <<<<<<<<<<<<<< |
asnO |
|