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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | cotE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| cotE | + | 1774337..1774882 | morphogenic protein |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Ginetti F, et al. (1996) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -40:+3 | 1774203..1774245 | TAAGTAAAGTTTCTAGGCACCCCTGCATACAATGGAACAGAAA |
Zheng LB & Losick R (1990): PE S1 RG DP DB |
| SigK | Promoter | -43:+5 | 1774269..1774316 | ATAAAAATGCACACTAGACAAATGCCCAGCATAAGATAACACGAAGAA |
Zheng LB & Losick R (1990): PE S1 RG DP Eichenberger P, et al. (2004): GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATA >>>>>>>>>>> <<<<<<<<<<< |
cotE |
|