Regulated Operon: cotE

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
cotE
+ 1774337..1774882 morphogenic protein
 

Operon evidence: Genome analysis
Reference: Ginetti F, et al. (1996)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -40:+3 1774203..1774245 TAAGTAAAGTTTCTAGGCACCCCTGCATACAATGGAACAGAAA Zheng LB & Losick R (1990): PE S1 RG DP DB
SigK Promoter -43:+5 1774269..1774316 ATAAAAATGCACACTAGACAAATGCCCAGCATAAGATAACACGAAGAA Zheng LB & Losick R (1990): PE S1 RG DP
Eichenberger P, et al. (2004): GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGGGACTAGGGGAGACAGTACCCCCAAGTCTCTTTTTTATATTGATA
     >>>>>>>>>>>         <<<<<<<<<<<
1774887..1774917
5..35
-16.8
cotE

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai