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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | cotJABC-yesJK |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| cotJA | + | 755244..755492 | cotJA-BAC | |||
| cotJB | + | 755437..755739 | ||||
| cotJC | + | 755754..756323 | COG3546 | cotJC-BAC | ||
| yesJ | yeeN, yfxC, yfxD | + | 756448..756990 | COG0454 | ||
| yesK | + | 756926..757315 |
| Operon evidence: | Northern blotting (1.9 kb transcript) |
|---|---|
| Reference: | Henriques AO, et al. (1995), Eichenberger P, et al. (2003), Yoshida K, et al. (2003) |
| Comments: | Northern blotting experiment by Yoshida. Eichenberger proposes a cotJABC-yesJ transcript, Henriques a cotJABC transcript. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -38:+6 | 755176..755219 | TTAGTCATAATCATGCCTCCTGCCTCATACCTATTAAGGTCATT |
Henriques AO, et al. (1995): PE DB RG |
| SpoIIID | Positive | -48:-19 | 755166..755195 | AAGTCGTGTTTTAGTCATAATCATGCCTCC |
Henriques AO, et al. (1995): DB RG |
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