Regulated Operon: csbA

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
csbA
- 3614146..3614376 putative membrane protein COG4897  

Operon evidence: terminator-probe plasmids
Reference: Boylan SA, et al. (1991)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -40:+4 3614401..3614444 ACGATTGTCCGATTCTTCATTTTTTACTATAATCAGATCAGATG Boylan SA, et al. (1991): PE DB RG
SigB Promoter -40:+3 3614457..3614499 ATGGTGATTGATTTTGGCTGAAAAGGGGTATGGTGTAAGTAGA Boylan SA, et al. (1991): PE DB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
GAATACCTGCTTTTACGTTTTAAAAGCAGGTTTTTTATACACAAA
     >>>>>>>>>>     <<<<<<<<<<
3614091..3614115
31..55
-14.9
 csbA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai