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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | ctpB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yvjB | ctpB | - | 3621386..3622828 | COG0793 |
| Operon evidence: | downstream gene is on the opposite strand |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | ND | ND | ND |
Pan Q, et al. (2003): RG DB, gfp assay |
| SigG | Promoter | -39:+14 | 3622857..3622909 | GATTACATGAAATCTCCATCCTTTACATATACTATCTCTAGGTTTTGGTAAAG |
Wang S, et al. (2006): AR, Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TGTCAATTAAAGGAGATGGTATTTCATCTCCTGTTTCTTTGTGCTTAA >>>>>>>>> <<<<<<<<< |
yvjB |
|