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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | guaD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| guaD | gde, yknA | - | 1381983..1382453 | guanine deaminase | COG0590 | guaD-BAC guaD-BAC |
| Operon evidence: | downstream gene is on the opposite strand |
|---|---|
| Reference: | Nygaard P, et al. (2000) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PucR | Positive | -72:-37 | 1382514..1382549 | CCCCCAAATACTTTGTTTATTTTGCACTTTTTTAAG |
Beier L, et al. (2002): DP |
| SigA | Promoter | -41:+8 | 1382470..1382518 | TTAAGAATGTTCTTTGCATTCTTTTCGGCTATACTAATAACACTCTATT |
Nygaaard P, et al. (2000): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAAAAGGATCAGGCATGCGCGGCCTGGTCCTTGTTATTTCTCCAA >>>>>>>>> <<<<<<<<< |
guaD |
|