Regulated Operon: guaD

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
guaD gde, yknA - 1381983..1382453 guanine deaminase COG0590 guaD-BAC guaD-BAC  

Operon evidence: downstream gene is on the opposite strand
Reference: Nygaard P, et al. (2000)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PucR Positive -72:-37 1382514..1382549 CCCCCAAATACTTTGTTTATTTTGCACTTTTTTAAG Beier L, et al. (2002): DP
SigA Promoter -41:+8 1382470..1382518 TTAAGAATGTTCTTTGCATTCTTTTCGGCTATACTAATAACACTCTATT Nygaaard P, et al. (2000): PE HM

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TAAAAGGATCAGGCATGCGCGGCCTGGTCCTTGTTATTTCTCCAA
     >>>>>>>>>       <<<<<<<<<
1381956..1381980
3..27
-17.7
guaD

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai