 |
Copyright: Human Genome Center, Inst. Med.
Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Factor type | ND |
|---|---|
| SWISS-PROT | O32138 |
| SubtiList | BG13983 |
| Consensus seq. | WWWCNTTGGTTAA |
| Comment | regulation of puc genes (purine degradation) |
| Link to | Phylogenetic profile, Weight matrix, Motif alignment & Similar conserved hexameric motifs |
| Operon | Regulated Gene | Sigma | Regulation | Absolute position | Location | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|---|---|
| guaD | guaD | SigA | Positive | 1382514..1382549 | -72:-37 | CCCCCAAATACTTTGTTTATTTTGCACTTTTTTAAG |
Beier L, et al. (2002): DP |
| pucABCDE | pucA | SigA | Negative | ND | ND | ND |
Beier L, et al. (2001): DB |
| yurHG | yurH | SigA | Positive | 3342770..3342805 | -81:-46 | TGGATACTGTGGCTAAAAAATAAACGTTTTTTTGGT |
Beier L, et al. (2002): DP |
| pucH | pucH | SigA | Positive | 3327732..3327772 | -92:-52 | TCTATAAAAACATTGGTTAAGGTGAATAATTTTCAATAGGA |
Beier L, et al. (2002): DP |
| ywoE | ywoE | SigA | Positive | 3752882..3752932 | -96:-46 | TGTCTCTTTTTCTTGTTTAAGCTGTTCAAATACAAACGGGAAAATTGTATA |
Beier L, et al. (2002): DP |
| pucRJKLM | pucJ | SigA | Positive | 3329405..3329433 | -96:-68 | AAACGAATCGTTTTTCGTCACTTTCAGCA |
Beier L, et al. (2002): DP |
| ureABC | ureA | SigA | Positive | 3769023..3769047 | -78:-54 | AAGAAGCTGATTTGGTCAAGGTAAC |
Brandenburg JL, et al. (2002): RG |
|