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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | lonA-ysxC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| lonA | lon | - | 2879531..2881855 | class III heat-shock ATP-dependent Lon protease | COG0466 | lonA-BAC |
| ysxC | - | 2878947..2879534 | COG0218 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Riethdorf S, et al. (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| CtsR | Negative | ND | ND | ND |
Kruger E, et al. (1998): DB |
| SigA | Promoter | -44:+17 | 2881937..2881997 | TCTTTTCCTTTTTCATATCAGAAAGAAAGGGTATACTACGAGGAGACTGTTTTATAGAAAA |
Riethdorf S, et al. (1994): PE |
| SigA | Promoter | -47:+17 | 2881865..2881928 | TGCCGTTTATTGTACAAGGATGAAAAAGTTGTATTATAATGGTTCATACTAAAGTCACGGAGGT |
Riethdorf S, et al. (1994): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ATAAACCGGTAGAGGATCCTCTACCGGTTTTATTTATCGTAT >>>>>>>>> <<<<<<<<< |
ysxC |
|