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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | mrgA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| mrgA | + | 3382592..3383053 | metalloregulation DNA-binding stress protein | COG0783 |
| Operon evidence: | downstream genes are on the opposite strand |
|---|---|
| Reference: | Chen L, et al. (1993) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PerR | Negative | -60:-7 | 3382504..3382557 | CTAAATTATAATTATTATAATTTAGTATTGATTTTTATTTAGTATATGATATAA |
Herbig AF, et al. (2001): FT |
| SigA | Promoter | -60:+4 | 3382504..3382567 | CTAAATTATAATTATTATAATTTAGTATTGATTTTTATTTAGTATATGATATAATTAAGTCAAC |
Fuangthong M & Helmann JD (2003): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCTGAACCTTAATCGGGTTCAGCTTTTTGTTTTTTCTT >>>>>>>>> <<<<<<<<< |
mrgA |
|