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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | nadE |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| nadE | outB, tscBGH, gsp-81 | + | 337848..338666 | NH3-dependent NAD+ synthetase | COG0171 | nadE-BAC |
| Operon evidence: | Genome analysis; downstream gene is on the opposite strand |
|---|---|
| Reference: | Albertini AM, et al. (1987) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -43:+3 | 337721..337766 | TCTCTTGTTCACAGTGAATGAAGACCTGTGCTATATTTAATAGGGA |
Antelmann H, et al. (1997): PE |
| SigB | Promoter | -42:+9 | 337773..337823 | ACAGTCATGATTCATTTTCATTGATTTAGGGAAATGATCAGTAATAAGGGA |
Antelmann H, et al. (1997): NB PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGAAAGCCCGCTCTCGGAGCGGGCTTTTGTCGTGTACAG >>>>>>>> <<<<<<<< |
nadE |
|