Regulated Operon: pbpX

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
pbpX
+ 1765128..1766303 penicillin-binding protein COG1680 x1202-BAC  

Operon evidence: Genome analysis
Reference: Cao M & Helmann JD (2004)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigW Promoter ND 1765049..1765087 TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA Cao M & Helmann JD (2004): RG
SigX Promoter ND 1765049..1765087 TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA Cao M & Helmann JD (2004): ROMA RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CACATTTACAATGAAGTTGTAACATTTGTTTTTTTAACA
     >>>>>>>   <<<<<<<
1766402..1766418
99..115
-6.1
pbpX

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai