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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | pbpX |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| pbpX | + | 1765128..1766303 | penicillin-binding protein | COG1680 | x1202-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Cao M & Helmann JD (2004) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigW | Promoter | ND | 1765049..1765087 | TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA |
Cao M & Helmann JD (2004): RG |
| SigX | Promoter | ND | 1765049..1765087 | TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA |
Cao M & Helmann JD (2004): ROMA RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CACATTTACAATGAAGTTGTAACATTTGTTTTTTTAACA >>>>>>> <<<<<<< |
pbpX |
|